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Proven Pipelines

Simplify, optimize, and streamline your studies from design to interpretation.

Our Proven Pipelines service offers:

Pre-configured Workflows:

  • Advanced Quality Control: Ensure data integrity with comprehensive QC measures.
  • Automated Workflows with SOPs: Implement standardized processes for reproducible results.
  • FAIR Compatibility: Utilize Nextflow and Docker images aligned with the FAIR (Findable, Accessible, Interoperable, and Reusable) framework.
  • Community-Validated Tools: Rely on bioinformatics tools endorsed by the scientific community.
  • Enhanced by Proprietary Packages: Benefit from our specialized R/Python packages for added efficiency.

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Open-source contributions:

  • Complex Workflow Implementations: Access our Nextflow pipelines for sophisticated analyses.
  • Nextflow Modules Collection: Utilize our library of modules for customizable workflows.
  • Efficient Docker Images: Leverage our container images for bioinformatics tools with a significant memory footprint reduction in comparison to biocontainers.

End-to-End Support:

  • Experimental Design Consultation: Optimize your study conditions and reduce costs with expert advice and know-how in Design of Experiments (DoE)
  • Sequencing Partnerships: Collaborate with our network of providers to ensure cost-efficiency and compliance with high regulatory standards when needed (e.g., MOT, BSL-3, ISO 9001, Certified Providers).
  • Result Interpretation Assistance: Transform complex data into actionable insights with comprehensive reporting and ongoing support.